Pairformer diffusion based model

Run Pairformer-based structure prediction for proteins, nucleic acids, ligands, and ions. Use the entity form for standard jobs or upload a complete Pairformer JSON input for advanced constraints.

Job name

It is recommended to replace it with a new name.

Upload PFD3 JSONPaste or upload sequence/SMILES using the entity tool box below:

Entity 1

Type

Protein

Copies

Paste the sequence belowUpload a sequence file

Advanced Options

Covalent bonds

MSA Mode

Run local pairformer database search

Number of output structures

Model seed

Leave empty to use the service default seed. An uploaded PFD3 JSON keeps its own seed when this field is empty.