FEP for Non-Covalent Ligands

In this module, you can upload a receptor and serveral ligand files in mol2 format. Please also upload a mapping txt that specified the interested pairs for FEP. Please note that this module is suitable for the non covalent bound ligands.

Job name

Default is PDB filename. It is better to set a new name:

1. Upload receptor PDB file

max. 10MB
user-manual

Choose file

2. Upload ligand mol2 files

At most 10 Ligs, re-upload receptor to clean list.
user-manual

Choose file

3. Upload ligand info file

Please upload a .csv file looks this:
Ligand_file_name,charge
...
####
,Index-1,Index-2,Filename_1,Filename_2,Str-sim,Eff-sim,Loose-sim,Connect
...

user-manual

Choose file

Submit